Sanworks LLC
  1. Companies
  2. Sanworks LLC
  3. Products
  4. Sanworks - Model r2+ - Bpod State ...

SanworksModel r2+ -Bpod State Machine for Precise Measurement of Animal Behavior

SHARE
The Bpod State Machine r2+ is a sophisticated electronic apparatus designed to accurately measure and analyze discrete behavioral events in small animals. It is especially suited for 2AFC (two-alternative forced choice) tasks, although it is adaptable to a wide range of behavioral assays such as conditioned place preference and self-stimulation. The system integrates seamlessly with up to five behavior ports, each featuring an infrared photogate, adjustable LED, and precise liquid dispensing capabilities. The device's ARM Cortex M7 processor, part of the Teensy 4.1 platform, delivers robust performance, operating at 600MHz with 1024KB of sRAM. The r2+ offers multiple I/O channels, including galvanically isolated Flex I/O with customizable configurations for digital or analog input/output. Compatibility with Arduino, Teensy, and Raspberry Pi modules enhances control and expands functionality beyond onboard capabilities. It requires some programming for custom behavioral protocol development and offers Python support through the prior r2 model. Open-source MATLAB API is available for experiment design.
Most popular related searches

Bpod State Machine r2+ is an electronic system for precise measurement of small animal behavior. It measures the instant when discrete events happen (a snout enters a port, a tongue breaks a photogate, etc). The state machine can react to events by rapidly changing aspects of the environment, providing an excellent low-latency link between behavioral events, stimuli and reinforcement. Bpod is most often used for the 2AFC (two alternative forced choice) behavioral paradigm, but has been adapted to power a diverse range of behavioral assays (e.g. conditioned place preference, go / no-go, self-stimulation, social value measurement and others).

State machine r2+ can interface with up to 5 behavior ports (a.k.a. Nosepokes). Each behavior port contains one infrared photogate to detect port entry, one visible LED with software-adjustable intensity, and one solenoid valve for dispensing precisely measured liquid rewards through a steel drinking tube. The state machine has onboard digital inputs and outputs for triggering and synchronization with neural data acquisition systems. Beyond its onboard channels, the state machine can interface with external microcontroller boards via the Bpod Arduino, Teensy and Raspberry Pi shields. Bpod Modules leverage external microcontrollers to add capabilities like analog I/O, audio, quadrature encoders and motor control.

Please be advised that Bpod is a flexible behavior platform, and is not guaranteed to do everything you have in mind out of the box. It has a learning curve, and will require some programming to develop a behavioral protocol. Documentation and information about getting started is available on the Bpod wiki. Individual support is available in the Bpod forums. A central focus of our company is to grow the current community of Bpod users, to optimize the system for ease of use, and to add to its capabilities.

State Machine r2+ features several hardware improvements over r2:

  • Processing Speed: An ARM Cortex M7 processor @ 600MHz, up from Cortex M4 @ 180MHz
  • USB Bandwidth: High Speed USB2 (up to 480Mbit/s), up from Full Speed (up to 12Mbit/s)
  • More onboard I/O:
    • One additional behavior port (5 total)
    • Flex I/O channels (4 total) are a new type of channel that can be configured in user code as digital out, digital in, analog out or analog in (both analog modes are 0-5V range, 12bit)
  • Memory: An 8MB PSRAM IC enables improved sampling and logic operations
  • Efficiency: A more efficient isolation scheme reduces the state machine's power draw for improved performance
  • Enclosure: A premium enclosure provides improved mechanical robustness

Processor

  • ARM Cortex M7: NXP iMXRT1062 as part of the Teensy 4.1 development platform
  • 600MHz Clock Speed
  • 1024KB sRAM
  • Programmable using the Arduino language

Behavior port channels

  • 5 behavior ports connect with CAT5/CAT6 cables to breakout boards mounted on your behavior chamber
  • Port LEDs are independently PWM modulated at 200kHz to control intensity in software
  • Port valves (12-24V, up to 250mA sustained) can be opened simultaneously, and are driven by an Infineon ISO1H811GAUMA1 isolated solenoid driver IC.

TTL input (trigger) channels

  • 2 channels: BNC connectors, 3-5V TTL logic, optically isolated

TTL output channels

  • 2 channels: 5V TTL logic, BNC connectors, galvanically isolated

Flex I/O channels

  • 4 channels: 0-5V range, 12-bit, galvanically isolated
  • Exposed as an 8-channel bank of screw terminals (4 channels, 4 GND)
  • Each channel can be configured by the user as:
    • Digital input (events generated on TTL level changes)
    • Digital output (5V TTL)
    • Analog input (0-5V range, 12-bit, events on voltage thresholds, data displayed online + logged to PC)
    • Analog output (0-5V range, 12-bit, voltage controlled by states or global timers)

Module channels

  • 3 module ports provide interfaces to Arduino-powered Bpod modules
  • All module ports provide isolated DC power to compatible modules, eliminating a separate USB cable
  • UART Baud rate: 1.3Mb/s default
  • Modules are available for:
    • Analog playback and patterned stimulation (4ch or 8ch)
    • Analog acquisition and threshold detection (8ch)
    • Audio playback and synthesis (2ch)
    • Waveform digital synthesis (1ch)
    • Rotary encoder integration
    • Solenoid valve driver (8ch)
    • I2C Bus interface
    • General purpose Arduino integration (shield)
    • General purpose Teensy integration (shield)

API

  • MATLAB API is provided to design and run behavioral experiments.
  • No Mathworks toolboxes are required.
  • OS support: Win7, Win10, Ubuntu 16-22.

Power

  • All state machine and module power is supplied from a single USB port (USB micro connector)
  • A DC barrel jack provides power for the isolated solenoid valve in each behavior port (12V DC adapter included)

Status indicator

  • A bright tri-color LED illuminates the Bpod enclosure to indicate its current status. Blue = disconnected, Green = connected (idle), Yellow = running a trial, Red = fault condition.

Material safety

Dimensions

  • L: 12cm (4 3/4")
  • W: 12cm (4 3/4")
  • H: 5cm (2")