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CensusTPH-Alkanes and Crude Oil Biodegradation

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At sites impacted by petroleum products or crude, the aromatic hydrocarbons benzene, toluene, ethylbenzene, xylenes (BTEX) as well as naphthalene and other polycyclic aromatic hydrocarbons (PAHs) are often the contaminants of greatest concern. However, alkanes are typically among the most abundant fractions in crude and petroleum products like gasoline and therefore significant contributors to total petroleum hydrocarbons (TPH) at impacted sites. In addition to an assays targeting the genes encoding enzymes responsible for biodegradation of BTEX, naphthalene, and other PAHs, QuantArray®-Petro includes an assay targeting the functional gene in the pathway for anaerobic biodegradation of alkanes. Alternatively, CENSUS® qPCR can be performed to quantify only the assA gene.

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Target MI Code    Relevance / Data Interpretation
Alkane Monooxygenase alkB Catalyzes the aerobic biodegradation of long chain petroleum hydrocarbons.
Alkane Monooxygenase 2 almA Catalyzes the aerobic biodegradation of C20-C32 alkanes by some Alcanivorax species considered dominant in marine systems.
Carbazole Dioxygenase CAR Catalyzes the oxidation of carbazole and other high molecular weight aromatics such as dibenzofuran.
Target MI Code    Relevance / Data Interpretation
Alkyl succinate synthase assA Initiates anaerobic biodegradation of alkanes with chain lengths as high as C18.