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Alternative Splicing Services
Genome-wide Alternative splicing and gene splicing events can be analyzed using microarrays. At ArrayGen, we help to design high quality probes for Alternative splicing analysis using Microarrays.
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- Genome-wide arrays for all splice events
- Arrays targeting only a set of specific splicing events, exons and exon/exon junctions
- Validate splicing events from RNA-seq next generation sequencing (NGS) data using microarrays
- Arrays containing customer specified splicing sites of interest
- 60-mer probe length
- Probe selection based on %TM, %GC, PolyX, Self hyb, high hybridization specificity, unique to target and nonoverlaping
- Removal of probes in repeat-masked and vector-masked regions
- Include exon probes to confirm the presence of an exon in the variant
- We design probes at both boundary (3` and 5`) and inside of each exons.
- Control probes are added based on Agilent protocol.In case you would like to add your own control probes, please let us know.
- Complete annotation of designed probes for fast and easy data interpretation
- High confidence in the design of your arrays
- We focus on quality assurance followed by quality control process of array design
- Maximum flexibility in array content and format to identify genome-wide expression levels of thousands of genes
- Ensures highest level of coverage, uniformity, specificity and sensitivity of your arrays
- Quick turnaround time from 3 days to a week
- Cost-effective formats for your array designing
- Complete support on array designing services