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MedGenome - Whole Genome DNA Sequencing Services
Whole Genome and Exome Sequencing applications have been widely accepted for use in genome wide association studies for complex diseases, variant calling to identify clinically actionable mutations and other specialized areas like identification of mutations that accumulate and give rise of tumor neo-antigens and shared antigens. At MedGenome, we routinely perform Whole Genome Sequencing and Exome Sequencing and analyses using best practices.
Whole Genome - Illumina and Kapa Solutions
- Illumina DNA Prep
- Illumina and Kapa PCR-Free Prep
- Nextera XT DNA Library Prep
- Kapa HyperPrep
Whole Exome - Agilent, Kapa and IDT Solutions
- Agilent SureSelect – Human and Mouse
- Kapa HyperExome
- IDT and other kits available by request
Targeted - Loop Genomics and Others
- Targeted Panels from Illumina, Roche and Agilent
- Amplicon Sequencing
- Loop 16S Metagenomics
- Support with experimental design and selection of appropriate workflow dependent on analysis needs
- Experienced in processing a wide range of sample types with options for low input and degraded samples
- End-to-end solutions for extraction, sample QC, library preparation, sequencing and bioinformatics analysis
- Advanced analysis offering includes custom visuals and publication ready figures for improved data interpretation
- Streamlined pipeline for fast & scalable analysis
- Customized reporting
- Interactive reports
- Publication-ready figures
- Improve data interpretation with support from MedGenome`s team of experts
BioFX’s genome analysis platform was built using state-of-the-art analysis tools for germline, low-frequency somatic variant analysis and annotation as well as structural variant, copy number variant analysis and annotation. We offer prebuilt and custom workflows to meet all analysis goals
- Detailed data quality, alignment and coverage stats
- Distribution of base changes for SNVs
- Circos plots for SNPs, Indels, CNVs and SV representation for selected genes
- Lollipop plots showing variants for genes
- Explore mutation signatures
Ordering and Data Delivery
MedGenome`s customer portal allows for easy sample submission and sample tracking during lab processing. Data QC, raw data and interactive analysis reports are delivered securely through customer portal.