American Society for Microbiology (ASM)
173 Articles found

American Society for Microbiology (ASM) articles

Identifying direct substrates of mitogen-activated protein kinases (MAPKs) and understanding how those substrates are selected is central to understanding how these ubiquitously activated enzymes generate diverse biological responses. In previous work, we identified several new candidate substrates for the MAPK ERK2 (extracellular signal-regulated kinase 2), including the nuclear pore complex protein Tpr (translocated promoter region). In this report, we identify sites on Tpr for ERK2 phosphoryl
Sep. 9, 2008

Tomá Vomastek, Marcin P. Iwanicki, W. Richard Burack, Divya Tiwari, Devanand Kumar, J. Thomas Parsons, Michael J. Weber, Vinay Kumar Nandicoori

The monocytic leukemia zinc finger protein MOZ and the related factor MORF form tetrameric complexes with ING5 (inhibitor of growth 5), EAF6 (Esa1-associated factor 6 ortholog), and the bromodomain-PHD finger protein BRPF1, -2, or -3. To gain new insights into the structure, function, and regulation of these complexes, we reconstituted them and performed various molecular analyses. We found that BRPF proteins bridge the association of MOZ and MORF with ING5 and EAF

Sep. 8, 2008

Nadine Pelletier, Lin Xiao, Song Ping Zhao, Kainan Wang, Cindy Degerny, Soroush Tahmasebi, Christelle Cayrou, Yannick Doyon, Siew-Lee Goh, Nathalie Champagne, Jacques Côté, Xiang-Jiao Yang

Silent chromatin in Saccharomyces cerevisiae is established in a stepwise process involving the SIR complex, comprised of the histone deacetylase Sir2 and the structural components Sir3 and Sir4. The Sir3 protein, which is the primary histone-binding component of the SIR complex, forms oligomers in vitro and has been proposed to mediate the spreading of the SIR complex along the chromatin fiber. In order to analyze the role of Sir3 in the spreading of the SIR complex, we performed a targeted gen
Sep. 8, 2008

Johannes R. Buchberger, Megumi Onishi, Geng Li, Jan Seebacher, Adam D. Rudner, Steven P. Gygi, Danesh Moazed

Salmonella enterica serovar Typhimurium is a main cause of bacterial food-borne diseases. As Salmonella can form biofilms in which it is better protected against antimicrobial agents on a wide diversity of surfaces, it is of interest to explore ways to inhibit biofilm formation. Brominated furanones, originally extracted from the marine alga Delisea pulchra, are known to interfere with biofilm formation in several pathogens. In this study, we have synthesized a small focused library o

Sep. 7, 2008

Sigrid C. J. De Keersmaecker, Joost C. A. Janssens, Hans Steenackers, Stijn Robijns, Edith Gellens, Jeremy Levin, Hui Zhao, Kim Hermans, David De Coster, Tine L. Verhoeven

Methylibium petroleiphilum PM1 is a well-characterized environmental strain capable of complete metabolism of the fuel oxygenate methyl tert-butyl ether (MTBE). Using a molecular genetic system which we established to study MTBE metabolism by PM1, we demonstrated that the enzyme MdpA is involved in MTBE removal, based on insertional inactivation and complementation studies. MdpA is constitutively expressed at low levels but is strongly induced by MTBE. MdpA is also involved in the reg

Sep. 7, 2008

Radomir Schmidt, Vince Battaglia, Kate Scow, Staci Kane, Krassimira R. Hristova

The thioether rings in the lantibiotics lacticin 3147 and nisin are posttranslationally introduced by dehydration of serines and threonines, followed by coupling of these dehydrated residues to cysteines. The prepeptides of the two-component lantibiotic lacticin 3147, LtnA1 and LtnA2, are dehydrated and cyclized by two corresponding bifunctional enzymes, LtnM1 and LtnM2, and are subsequently processed and exported via one bifunctional enzyme, LtnT. In the nisin synthetase complex, the

Sep. 6, 2008

Gert N. Moll, Anneke Kuipers, Jenny Meijer-Wierenga, Rick Rink, Leon D. Kluskens

A metagenomic library of activated sludge was screened for bleomycin resistance genes. Two genes were identified that differed greatly from each other, from the genes of bleomycin-producing actinomycetes, and from those of clinical isolates. Therefore, the nonclinical environment is a rich reservoir of new resistance elements, and metagenomics can be used to sample the resistome rapidly.

Sep. 5, 2008

kentaro miyazaki, Toshio Mori, Shiori Mizuta, Hikaru Suenaga

SMAUG (SMG) is an RNA-binding protein that functions as a key component of a transcript degradation pathway that eliminates maternal mRNAs in the bulk cytoplasm of activated Drosophila melanogaster eggs. We previously showed that SMG destabilizes maternal Hsp83 mRNA by recruiting the CCR4-NOT deadenylase to trigger decay; however, the cis-acting elements through which this was accomplished were unknown. Here we show that Hsp83 transcript degradation is regulated by a major element, the Hsp83 mRN
Sep. 5, 2008

Jennifer L. Semotok, Hua Luo, Ramona L. Cooperstock, Angelo Karaiskakis, Heli K. Vari, Craig A. Smibert, Howard D. Lipshitz

A new ketoreductase useful for asymmetric synthesis of chiral alcohols was identified in the cyanobacterium Synechococcus sp. strain PCC 7942. Mass spectrometry of trypsin-digested peptides identified the protein as 3-ketoacyl-[acyl-carrier-protein] reductase (KR) (EC 1.1.1.100). The gene, referred to as fabG, was cloned, functionally expressed in Escherichia coli, and subsequently purified to homogeneity. The enzyme displayed a temperature optimum at 44°C and a broad pH optimum betw

Sep. 4, 2008

Dirk Weuster-Botz, Kathrin Hölsch, Jan Havel, Martin Haslbeck

To analyze the orientation in target cell membranes of the pediocin-like bacteriocin (antimicrobial peptide) curvacin A, 55 variants were generated by site-directed mutagenesis and their potencies against four different target cells determined. The result suggest that the somewhat hydrophilic short central helix (residues 19 to 24), along with the N-terminal β-sheet-like structure (residues 1 to 16), inserts in the interface region of the target cell membrane, with Ala22 close to

Sep. 4, 2008

Helén Sophie Haugen, Per Eugen Kristiansen, Gunnar Fimland, Jon Nissen-Meyer