Proteome Software, Inc.

Proteome Software offers specialized analytics solutions for mass spectrometry, catering to both DDA and DIA proteomics, as well as small molecule experiments. Their flagship product, Scaffold Software, provides dynamic data handling capabilities allowing researchers to compile proteome databases with statistical analysis rapidly, overcoming many traditional challenges associated with free-ware and add-on utilities. Scaffold's data structure supports ongoing updates, enabling seamless integration of expression profile information and rapid annotation with structural and functional protein descriptors. Their solutions are tailored for managing core facilities, shared resources, and complex software pipelines, empowering researchers to focus on scientific discovery by simplifying data processing tasks. Proteome Software's repository of tutorials ensures that even newcomers to proteomics can quickly benefit from their powerful tools, making them an invaluable asset in the field of biological identification and quantitative research.