Proteome Software - Version Scaffold E -Scaffold Software for Small Molecule LC-MS Analysis

Proteome Software's suite of Scaffold products offers a comprehensive solution for the identification and quantification of small molecules through LC-MS analysis, catering to researchers who demand both elegance and simplicity in their data processing workflows. Compatible with raw data from leading vendor instrumentation like Thermo, Sciex, and Agilent, Scaffold supports both MS1 and MS/MS data. Users can leverage multiple spectral libraries such as NIST, HMDB, and LIPID MAPS or construct personalized spectral libraries from their own instrument-generated spectra, enhancing customization in analysis. The software is particularly suited for managing core facilities or shared resource departments, addressing gaps in software pipelines, and exploring advanced methods such as DIA proteomics. Proteome Software also emphasizes education and support through detailed tutorials, videos, and an active YouTube channel, helping users from beginners to advanced practitioners efficiently utilize their Scaffold products.